Haplogroup Q-L54

Subclade of Y-DNA haplogroup Q-L53
Haplogroup Q-L54
Possible place of originEurasia
AncestorQ-L53
DescendantsQ-L330, Q-M3, Q-M971, Q-Z780, Q-L804
Defining mutationsL54

Haplogroup Q-L54 is a subclade of Y-DNA haplogroup Q-L53. Q1a3a-L54 is defined by the presence of the L54 Single Nucleotide Polymorphism (SNP).

Distribution

Q-L54 has descendants across Western and Central Europe, the North and East of Asia, and the Americas. It includes two of the major pre-Columbian paternal lineages in the Americas: Q-M3 and Q-M971. The boy Anzick-1, who lived 12,600 years ago and was found in the state of Montana, has a Y-chromosome that refers to haplogroup Q-M971 (Q-L54*(xM3)).[1][2][3] Q-L54 descendant lines also include two Eurasian paternal lineages, the Central Asian Q-L330 lineage and the Scandinavian Q-L804.[3] Q-L330 is also found in some men with Romaniote Jewish paternal lines from Greece. Q-L804 is Scandinavian and the TMRCA is just over 3000 years.[4] Haplogroup Q‐L54 is dominant in two North Siberian populations, the Kets and Selkups, with frequencies of 97.7% and 66.7%, respectively.[5]

Associated SNP's

Q-L54 is currently defined by the L54 SNP alone.

Subgroups

Current status of the polygenetic tree for Q-L54 is published by Pinotti et al. in the article Y Chromosome Sequences Reveal a Short Beringian Standstill, Rapid Expansion, and early Population structure of Native American Founders. Calibrated phylogeny of Y haplogroup Q-L54.[6]

  • L54
    • Q-L330
    • Q-MPB001 (18.9 kya)
      • Q-CTS1780
      • Q-M930
        • Q-L804
        • Q-M3 (15.0 kya)
          • Q-Y4308
          • Q-M848 (14.9 kya)

The 2013 version of the polygenetic tree for haplogroup Q-L54 made by Thomas Krahn at the Genomic Research Center: Proposed Tree.

  • L54
    • M3, L341.2
      • M19
      • M194
      • M199, P106, P292
      • PAGES104, PAGES126
      • PAGES131
      • L663
      • SA01
      • L766, L767
      • L883, L884, L885, L886, L887
      • L888, L889, L890, L891
    • L804, L805
      • L807
    • Z780
      • L191
      • L400, L401
    • L456
    • L568, L569, L570, L571
      • L567
      • L619.1
    • L330, L334
      • L329, L332, L333

See also

Y-DNA Q-M242 Subclades

  • Q-M242
  • Q-L275
  • Q-L330
  • Q-L717
  • Q-L940
  • Q-L53
  • Q-L54
  • Q-M120
  • Q-M25
  • Q-M3
  • Q-M323
  • Q-M346
  • Q-NWT01
  • Q-P89.1
  • Q-Z780

Y-DNA Backbone Tree

  • v
  • t
  • e
Phylogenetic tree of human Y-chromosome DNA haplogroups [χ 1][χ 2]
"Y-chromosomal Adam"
A00 A0-T [χ 3]
A0 A1 [χ 4]
A1a A1b
A1b1 BT
B CT
DE CF
D E C F
F1  F-Y27277 [χ 5]  F3  GHIJK
G HIJK
IJK H
IJ K
I      LT [χ 6]       K2 [χ 7]
I1   I2  J1   J2  L     T  K2e K2d K2c K2b [χ 8]  K2a
K2b1 [χ 9]   P [χ 10] K-M2313 [χ 11]
S [χ 12]  M [χ 13]    P1   NO1
P1c P1b P1a N O
R Q
Footnotes
  1. ^ Van Oven M, Van Geystelen A, Kayser M, Decorte R, Larmuseau HD (2014). "Seeing the wood for the trees: a minimal reference phylogeny for the human Y chromosome". Human Mutation. 35 (2): 187–91. doi:10.1002/humu.22468. PMID 24166809. S2CID 23291764.
  2. ^ International Society of Genetic Genealogy (ISOGG; 2015), Y-DNA Haplogroup Tree 2015. (Access date: 1 February 2015.)
  3. ^ Haplogroup A0-T is also known as A-L1085 (and previously as A0'1'2'3'4).
  4. ^ Haplogroup A1 is also known as A1'2'3'4.
  5. ^ F-Y27277, sometimes known as F2'4, is both the parent clade of F2 and F4 and a child of F-M89.
  6. ^ Haplogroup LT (L298/P326) is also known as Haplogroup K1.
  7. ^ Between 2002 and 2008, Haplogroup T-M184 was known as "Haplogroup K2". That name has since been re-assigned to K-M526, the sibling of Haplogroup LT.
  8. ^ Haplogroup K2b (M1221/P331/PF5911) is also known as Haplogroup MPS.
  9. ^ Haplogroup K2b1 (P397/P399) is also known as Haplogroup MS, but has a broader and more complex internal structure.
  10. ^ Haplogroup P (P295) is also klnown as K2b2.
  11. ^ K-M2313*, which as yet has no phylogenetic name, has been documented in two living individuals, who have ethnic ties to India and South East Asia. In addition, K-Y28299, which appears to be a primary branch of K-M2313, has been found in three living individuals from India. See: Poznik op. cit.; YFull YTree v5.08, 2017, "K-M2335", and; PhyloTree, 2017, "Details of the Y-SNP markers included in the minimal Y tree" (Access date of these pages: 9 December 2017)
  12. ^ Haplogroup S, as of 2017, is also known as K2b1a. (Previously the name Haplogroup S was assigned to K2b1a4.)
  13. ^ Haplogroup M, as of 2017, is also known as K2b1b. (Previously the name Haplogroup M was assigned to K2b1d.)

References

  1. ^ M. Rasmussen et al. The genome of a Late Pleistocene human from a Clovis burial site in western Montana // Nature. 2014. V. 506. P. 225–229.
  2. ^ Jennifer A. Raff & Deborah A. Bolnick. Palaeogenomics: Genetic roots of the first Americans // Nature. 2014. V. 506. P. 162–163.
  3. ^ a b Kivisild, Toomas (2017-03-04). "The study of human Y chromosome variation through ancient DNA". Human Genetics. 136 (5). Springer Nature: 529–546. doi:10.1007/s00439-017-1773-z. ISSN 0340-6717. PMC 5418327. PMID 28260210.
  4. ^ "Q-L804 YTree".
  5. ^ Karafet, Tatiana M.; Osipova, Ludmila P.; Savina, Olga V.; Hallmark, Brian; Hammer, Michael F. (2018). "Siberian genetic diversity reveals complex origins of the Samoyedic-speaking populations". American Journal of Human Biology. 30 (6). Wiley: e23194. doi:10.1002/ajhb.23194. ISSN 1042-0533. PMID 30408262.
  6. ^ Pinotti, Thomaz; Bergström, Anders; Geppert, Maria; Bawn, Matt; Ohasi, Dominique; Shi, Wentao; Lacerda, Daniela R.; Solli, Arne; Norstedt, Jakob; Reed, Kate; Dawtry, Kim; González-Andrade, Fabricio; Paz-y-Miño, Cesar; Revollo, Susana; Cuellar, Cinthia; Jota, Marilza S.; Santos, José E.; Ayub, Qasim; Kivisild, Toomas; Sandoval, José R.; Fujita, Ricardo; Xue, Yali; Roewer, Lutz; Santos, Fabrício R.; Tyler-Smith, Chris (2018). "Y Chromosome Sequences Reveal a Short Beringian Standstill, Rapid Expansion, and early Population structure of Native American Founders". Current Biology. 29 (1). Elsevier BV: 149–157.e3. doi:10.1016/j.cub.2018.11.029. hdl:20.500.12727/6107. ISSN 0960-9822. PMID 30581024.

External links

  • The Y-DNA Haplogroup Q Project